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234    Chapter 7    Anatomy and Function of a Gene: Dissection Through Mutation


              Figure 7.15  The Ames test identifies potential      thereby prevents the ready repair of mutations caused by
              carcinogens. Investigators mix a compound to be tested with   the potential mutagen. The bacteria also carry a third muta-
                        −
              cells of a His  strain of Salmonella typhimurium and with a solution   tion causing defects in the cell wall that allows tested
              of rat liver enzymes (which can sometimes convert a harmless   chemicals easier access to the cell interior.
                                         +
              compound into a mutagen). Only His  revertants grow on a petri
                                                          +
              plate without histidine. If this plate (bottom left) has more His    Because most agents that cause mutations in bacteria
              revertants than a control plate (also without histidine) containing   should also damage the DNA of higher eukaryotic organ-
              unexposed cells (bottom right), the compound is considered   isms, any mutagen that increases the rate of mutation in bac-
              mutagenic and a potential carcinogen. The rare revertants on the   teria might be expected to cause cancer in people and other
              control plate represent the rate of spontaneous mutation.  mammals. Mammals, however, have complicated metabolic
                     Test for mutagenicity  Control: no mutagen    processes capable of inactivating hazardous chemicals. On
                                                                   the other hand, other biochemical events in mammals can
                                                                   create a mutagenic substance from nonhazardous chemicals.
                                                                   To simulate the action of mammalian metabolism, toxicolo-
                                                                   gists often add a solution of rat liver enzymes to the chemical
                         +      +                  +               under analysis by the Ames test (Fig. 7.15). Because this
                                                                   simulation is not perfect, Food and Drug Administration
                                                                   agents ultimately assess whether bacterial mutagens identi-
                                                                   fied by the Ames test can cause cancer in rodents by includ-
                                                                   ing the agents in test animals’ diets.
              Suspension of His –        Suspension of His –
              mutant bacteria            mutant bacteria
                   Rat liver enzymes          Rat liver enzymes
                                                                     essential concepts
                       Suspension of potential
                       mutagen/carcinogen                            •  Certain natural agents can induce spontaneous
                                                                       mutations. These agents include radiations (such as
                                                                       X-rays and UV light) and chemical reactions (such as
                   Mixture is plated onto   Mixture is plated onto     deamination and oxidation) that damage DNA.
                   medium without histidine  medium without histidine
                                                                     •  DNA replication errors are another source of spontaneous
                                                                       mutations. Many of these errors result from base
                                                                       tautomerization or expansions/contractions of
                                                                       trinucleotide repeats.
                                                                     •  Mutagens are agents that raise the mutation frequency
                                                                       above the spontaneous rate. In research, mutagens can
                   Many bacterial colonies  Few bacterial colonies
                          –
                                                  –
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                                                       +
                   Many His       His  revertants  Few His       His  revertants  help generate mutations of interest for further study.
                  The U.S. Food and Drug Administration tries to identify   7.3   DNA Repair Mechanisms
              potential carcinogens by using the Ames test to screen for
              chemicals that cause mutations in bacterial cells (Fig. 7.15).
              This test asks whether a particular   chemical can induce   learning objectives
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                Histidine  (His ) revertants of a special Histidine  (His )
              mutant strain of the bacterium  Salmonella typhimurium. The   1.  List mechanisms by which cells can repair DNA with
                 +
              His  revertants can synthesize all the histidine they need   altered or damaged nucleotides.
              from simple compounds in their environment, whereas the   2.  Contrast the outcomes of homologous recombination
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              original His  mutants cannot make histidine, so they can   and nonhomologous end-joining mechanisms for the
              survive only if  histidine is supplied.                   repair of double-strand breaks.
                  The advantage of the Ames test is that only revertants   3.  Explain how methyl-directed mismatch repair can
              can grow on petri plates that do not contain histidine, so it   distinguish which strand to repair when replication
              is possible to examine large numbers of cells from an orig-  errors occur.
                      −
                                              +
              inally His  culture to find the rare His  revertants induced   4.  State why cells use certain DNA repair systems only as
              by the chemical in question. To increase the sensitivity of   a last resort.
                                      −
              mutation detection, the His  strain used in the Ames test   5.  Describe the potential consequences for human health
              system contains a second mutation that inactivates a DNA   of mutations in genes that specify DNA repair factors.
              repair system (to be described in the next section) and
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