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230    Chapter 7    Anatomy and Function of a Gene: Dissection Through Mutation


              Figure 7.12  Expansion of trinucleotide repeats by slipped mispairing during DNA replication. (a) Pausing of DNA
              polymerase at repeat sequences during DNA replication allows slippage of the newly synthesized DNA strand (blue) relative to the template
              strand (gray). Because of the repeats, the slipped strand can still pair with the template, and DNA polymerization can continue. Another round
              of DNA replication will establish the additional repeats in double-stranded DNA. (b) Similarly, slippage of the template strand relative to the
              newly synthesized DNA strand can result in the deletion of repeats.
                       (a) Trinucleotide repeat expansion              (b) Trinucleotide repeat contraction
                                       DNA polymerase                                  DNA polymerase
                            2    3     pauses and newly                                pauses and template
                                       synthesized strand slips                        strand slips
                             CAG CAG
                           1    4                                          1    2
                       5'  CAG  CAG  3'                                5'  CAG  CAG  3'
                       3'  GTC  GTC  GTC  GTC  GTC  GTC  5'            3'  GTC  GTC  GTC  GTC  5'
                           1    2    3    4    5    6                      1    4    5    6
                                         Polymerization                                  Polymerization
                                         continues                          2  GTC  GTC  3  continues

                            2    3
                             CAG CAG
                           1    4    5    6    7    8                      1    2    3    4
                       5'  CAG  CAG  CAG  CAG  CAG  CAG  3'            5'  CAG  CAG  CAG  CAG  3'
                       3'  GTC  GTC  GTC  GTC  GTC  GTC  5'            3'  GTC  GTC  GTC  GTC  5'
                           1    2    3    4    5    6                      1    4    5    6
                                                                                GTC  3
                                         Next round of DNA replication                   Next round of DNA replication
                                                                            2
                                                                             GTC
                           1    2    3    4    5    6    7    8            1    2    3    4
                       5'  CAG  CAG  CAG  CAG  CAG  CAG  CAG  CAG  3'  5'  CAG  CAG  CAG  CAG  3'
                       3'  GTC  GTC  GTC  GTC  GTC  GTC  GTC  GTC  5'  3'  GTC  GTC  GTC  GTC  5'
                           1    2    3    4    5    6    7    8            1    2    3    4
                                  Repeat number >6                            Repeat number <6








                  Researchers do not understand well a curious feature   Mutagens Induce Mutations
              of trinucleotide repeat diseases: Pre-mutation alleles of
              particular genes tend to expand either in the male or female   Mutations make  genetic analysis possible, but  most
              germ lines, but not both. For example, in Fig. 7.11b you     mutations appear spontaneously at such a low rate that
              can see that the alleles causing fragile X syndrome were     researchers have looked for controlled ways to increase
              inherited from mothers with pre-mutation alleles, but the   their occurrence. H. J. Muller, an original member of
              repeat number does not expand appreciably in the sperm   Thomas Hunt Morgan’s  Drosophila group, first showed
              produced by a father with a pre-mutation allele. Strangely,   that exposure to a dose of X-rays higher than the naturally
              for Huntington disease the situation is the opposite: Dis-  occurring level increases the mutation rate in fruit flies
              ease alleles almost always originate in the male, but not in   (Fig. 7.13). 
              the female, germ line.                                   Muller exposed  male  Drosophila  to increasingly
                  A variety of biochemical mechanisms could be respon-  large doses of X-rays and then mated these males with
              sible for trinucleotide repeat expansion and contraction. One   females that had one X chromosome containing an easy-
              particularly well-characterized mechanism is  slipped   to- recognize dominant mutation causing Bar eyes. This
                mispairing during DNA replication. DNA polymerase often   X chromosome (called a Balancer) also carried chromo-
              pauses as it replicates through repeat regions, which allows   somal rearrangements known as  inversions that pre-
              one DNA strand (either the newly synthesized strand or the   vented it from crossing-over with other X chromosomes.
              template strand) to slip relative to the other one (Fig. 7.12).   (Chapter 13   explains the details of this phenomenon.)
              Because the sequence contains repeats, the slipped strand   Some of the F 1  daughters of this mating were heterozy-
              and the other strand can pair out of register, forming a loop.   gotes carrying a mutagenized X from their father and a
              After another round of DNA replication, this slipped mi-  Bar-marked X from their mother. If X-rays induced a re-
              spairing can result in expansion or contraction of  trinucleotide   cessive lethal mutation anywhere on the paternally de-
              repeat number in both DNA strands.                   rived X chromosome, then these F 1  females would be
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