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6.2 The Watson and Crick Double Helix Model of DNA   187


                       as in a normal phage infection, producing and disgorging   Figure 6.8  X-ray diffraction patterns reflect the helical
                       hundreds of progeny particles. From these observations,   structure of DNA. Photograph of an X-ray diffraction pattern
                       Hershey and Chase concluded that phage genes are made   produced by oriented DNA fibers, taken by Rosalind Franklin and
                       of DNA.                                             Maurice Wilkins in late 1952. The crosswise pattern of X-ray
                          The Hershey-Chase experiment, although less rigor-  reflections indicates that DNA is helical.
                       ous than the Avery project, had an enormous impact. In the   © Science Source
                       minds of many investigators, it confirmed Avery’s results
                       and extended them to viral particles. The spotlight was now
                       on DNA.



                        essential concepts

                         •  DNA is a polymer of nucleotides joined by phosphodiester
                          bonds. Nucleotides are made of deoxyribose, phosphate,
                          and one of four nitrogenous bases.
                         •  DNA is localized almost exclusively in the chromosomes   pattern, he realized that it “must have a regular structure
                          within the nucleus of a cell.                    that could be solved in a straightforward fashion.”
                         •  Avery and his colleagues showed that a purified DNA   In this section, we analyze DNA’s three-dimensional
                          preparation from S (virulent) bacteria could transform R   structure, looking first at significant details of the nucleo-
                          (nonvirulent) bacteria into the S form; this result was   tide building blocks, then at how those subunits are linked
                          strong evidence for DNA as the genetic material.  together in a polynucleotide chain, and finally, at how two
                         •  Hershey and Chase grew T2 bacteriophages in the   chains associate to form a double helix.
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                          presence of either  S (labels proteins) or  P (labels
                                                    32
                          DNA). They showed that it is the  P-tagged viral DNA
                          that contains the genetic instructions to produce more   Nucleotides Are the Building
                          virus particles.
                                                                           Blocks of DNA
                                                                           DNA is a long polymer composed of subunits known as
                                                                           nucleotides. Each nucleotide consists of a  deoxyribose
                        6.2   The Watson and Crick Double                  sugar, a phosphate, and one of four nitrogenous bases. De-
                                                                           tailed knowledge of these chemical constituents and the
                       Helix Model of DNA                                  way they combine played an important role in Watson and
                                                                           Crick’s model building.
                        learning objectives
                                                                           The components of a nucleotide
                        1.  Describe the key features of the Watson-Crick model   Figure 6.9 depicts the chemical composition and structure
                            for DNA structure.                             of deoxyribose, phosphate, and the four nitrogenous bases;
                        2.  Explain what is meant by the antiparallel polarity of the   how these components come together to form a nucleotide;
                            two strands of DNA within the double helix.    and how phosphodiester bonds link the nucleotides in a
                        3.  Distinguish the different structural forms of DNA from   DNA chain. Each individual carbon or nitrogen atom in the
                            one another.                                   central ring structure of a nitrogenous base is assigned a
                                                                           number: 1–9 for purines, and 1–6 for pyrimidines. The
                                                                           carbon atoms of the deoxyribose sugar are distinguished
                       Under appropriate experimental conditions, purified mol-  from atoms within the nucleotide base by the use of primed
                       ecules of DNA can align alongside each other in fibers to   numbers from 1′ to 5′. Covalent attachment of a base to the
                       produce an ordered structure. And just as a crystal chande-  1′ carbon of deoxyribose forms a nucleoside. The addition
                       lier scatters light to produce a distinctive pattern on the   of a phosphate group to the 5′ carbon forms a complete
                       wall, DNA fibers scatter X-rays to produce a characteristic   nucleotide.
                       diffraction pattern (Fig. 6.8). A knowledgeable X-ray crys-
                       tallographer can interpret DNA’s diffraction pattern to de-
                       duce certain aspects of the molecule’s three-dimensional   Connecting nucleotides to form a DNA chain
                       structure. When in the spring of 1951 the 23-year-old   As Fig. 6.9 shows, a DNA chain composed of many nucle-
                       James Watson learned that DNA could project a diffraction   otides has  polarity: an overall direction. Phosphodiester
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