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140    Chapter 5    Linkage, Recombination, and the Mapping of Genes on Chromosomes


              Figure 5.7  Recombination helps ensure proper        arms, but it also is a key component of the centromeres
              chromosome segregation during meiosis I. (a) Mouse   themselves. We will discuss in detail how cohesin con-
              chromosomes during mid-prophase of meiosis I in a primary   nects sister chromatids during mitosis and meiosis in
              spermatocyte. A protein component of the synaptonemal complex is   Chapter 12.
              red, a component of recombination nodules is green, and a
              component of centromeres is blue. Each bivalent has at least one   The importance of crossing-over to proper chromo-
              recombination nodule, although some are hard to see. (b) Mouse   some segregation is underlined by the fact that each biva-
              chromosomes in late prophase of meiosis I (diakinesis). Note that each   lent in Figs. 5.7a and b has at least one recombination
              bivalent has at least one chiasma (the arrow points to one example),   nodule or chiasma. In fact, a mechanism called interference
              indicating that crossing-over occurred earlier. (c) Artist’s representation   that occurs in almost all sexually reproducing organisms
              of cohesin complexes (orange rings) along the chromosome arms of a
              bivalent during metaphase of meiosis I; cohesin at the centromeres is   helps ensure that each chromosome pair undergoes at least
              not shown. Cohesin complexes distal to the crossover point keep   one crossover, thus preventing nondisjunction of any chro-
              sister chromatids together. Arrows pointing toward the poles indicate   mosome except when rare mistakes occur. We discuss
              the forces that try to pull the homologous chromosomes apart.  interference in more detail later in this chapter.
                a: © Dr. Paula Cohen & Dr. Miguel Angel Brieño-Enríquez, The Cohen Lab,
              Center for Reproductive Genomics, Cornell University, Ithaca, NY; b: © Dr. Paula
              Cohen & Dr. Kim Holloway, The Cohen Lab, Center for Reproductive Genomics,
              Cornell University, Ithaca, NY                       Recombination Frequency Reflects
                        (a) Prophase I (Pachytene)
                                                                   the Distance Between Two Genes
                                                                   Thomas Hunt Morgan’s intuitions that chiasmata represent
                                                                   sites of physical crossing-over between chromosomes and
                                                                   that such crossing-over may result in recombination, led
                                                                   him to the following logical deduction: Different gene pairs
                                                                   exhibit different linkage frequencies because genes are ar-
                                                                   ranged in a line along a chromosome. The closer together
                                                                   two genes are on the chromosome, the smaller their chance
                                                                   of being separated by an event that cuts and recombines the
                                                                   line of genes. To look at it another way, if we assume for
                                                                   the moment that chiasmata can form anywhere along a
                                                                   chromosome with equal likelihood, then the probability of
                                                                   a crossover occurring between two genes increases with the
                         (b) Prophase I (Diplotene)
                                                                   distance separating them. If this is so, the frequency of ge-
                                                                   netic recombination also must increase with the distance
                                                                   between genes. 
                                                                       To illustrate the point, imagine pinning to a wall a
                                                                   10-inch piece of ribbon containing tiny black dots along
                                                                   its length and then repeatedly throwing a dart to see where
                                                                   you will cut the ribbon. You would find that practically
                                                                   every throw of the dart separates a dot at one end of the
                                                                   ribbon from a dot at the other end, while few if any throws
                                                                   separate any two particular dots positioned right next to
                                                                   each other.
                                                                       Alfred H. Sturtevant, one of Morgan’s students, took
                                                                   this idea one step further. He proposed that the percentage
                         (c) Metaphase  I                          of total progeny that were recombinant types, the recombi-
                               Spindle pole                        nation frequency (RF), could be used as a gauge of the
                                                                   physical distance separating any two genes on the same
                                                                   chromosome. Sturtevant arbitrarily defined one RF per-
                                     Centromere
                                                                   centage point as the unit of measure along a chromosome;
                                       Cohesin complex             later, another geneticist named the unit a  centimorgan
                                                                   (cM) after T. H. Morgan. Mappers often refer to a centim-
                                                                   organ as a map unit (m.u.). Although the two terms are
                                                                   interchangeable, researchers prefer one or the other, de-
                          Chiasma
                                                                   pending on their experimental organism.  Drosophila ge-
                                     Centromere                    neticists, for example, use map units while human
                                                                   geneticists  use  centimorgans.  In  Sturtevant’s  system,  1%
                                                                   RF = 1 cM = 1 m.u. 
                               Spindle pole
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