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206    Chapter 6    DNA Structure, Replication, and Recombination



                 FEATURE FIGURE 6.27 (Continued)


                 Step 6 Resolution of the double Holliday junction intermediate. The two interlocked nonsister chromatids must disengage.
                 Separation is achieved by breakage of two DNA strands at each Holliday junction by an enzyme called resolvase (not shown); the
                 strands are subsequently rejoined by DNA ligase (not shown). Different blue and red strands are cleaved at each junction; one junc-
                 tion is cleaved at the strands indicated by yellow arrows, and the strands indicated by the green arrows are cleaved at the other
                 junction. At each junction, the strands are cut and rejoined so that red DNA connects to blue DNA and vice versa. Crossing-over
                 results because each of the four strands is cut once and rejoined. Note in the diagram at the bottom that both of the recombinant
                 chromatids have short heteroduplex regions.


                                           Holliday junction 1            Holliday junction 2

                                   A                                                         B
                     5'                                                                                    3'

                     3'                                                                                    5'

                     5'                                                                                     3'

                     3'                                                                                     5'
                                   a                                                          b

                                                          Crossover products
                                   A                                                          b
                      5'                                                                                   3'
                      3'                                                                                   5'
                                   a                                                          B
                      5'                                                                                   3'
                      3'                                                                                   5'


                 Noncrossover Pathway                              Step 5′ DNA synthesis and ligation. The remaining gap in the
                                                                   double-stranded DNA sequence is filled by DNA synthesis (red
                 Step 4′ Strand displacement and annealing. Just as in Step 4   dots), and DNA ligase forms phosphodiester bonds to rejoin the
                 of the Crossover Pathway, the invading strand (arrow) is first   DNA strands. The result is no crossover, but a heteroduplex re-
                 extended by DNA synthesis (blue dots) using the nonsister   gion nonetheless remains in one chromatid.
                 chromatid (blue) as a template. But next, an anticrossover he-
                 licase enzyme (not shown) disentangles the invading strand
                 and the nonsister chromatid to yield the intermediates dia-  5'  A                       B       3'
                 grammed.
                                                                  3'                                              5'
                       A                               B                    Ligase       Heteroduplex region
               5'                                              3'
                                                                          a                                b
                                                                  5'                                              3'
               3'                                              5'
                                      Heteroduplex region         3'                                              5'
                       a                                b                                          Ligase
               5'                     3'                       3'
                                                                                  Noncrossover products
               3'                                              5'         A                                B
                                                                  5'                                              3'
                                  Invading strand
                                                                  3'                                              5'
                                                                          a                                b
                                                                  5'                                              3'
                                                                  3'                                              5'
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