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8.5 The Effects of Mutations on Gene Expression and Function   299


                       There is nothing to prevent an mRNA from having more    In eukaryotes, the small ribosome subunit binds at the 5′
                       than one ribosome binding site, and in fact, many prokary-  cap and migrates until it encounters the initiation site.
                       otic messages are polycistronic: They contain the informa-  •  In prokaryotes, the primary transcripts are mRNAs
                       tion of several genes (sometimes referred to as cistrons),   immediately ready for translation. In eukaryotes, primary
                       each of which can be translated independently starting at   transcripts are processed prior to translation into mature
                       its own ribosome binding site (Table 8.1).              mRNAs through the addition of 5′ caps and poly-A tails,
                          In eukaryotes, by contrast, the small ribosomal subunit   as well as the removal of introns.
                       first binds to the methylated cap at the 5′ end of the mature
                       mRNA and then migrates through the 5′ UTR to the initia-
                       tion site. This site is almost always the first AUG codon en-
                       countered by the ribosomal subunit as it moves along, or   8.5   The Effects of Mutations on
                       scans, the mRNA in the 5′-to-3′ direction (see Fig. 8.25a and
                       Table 8.1). Because of this scanning mechanism, initiation in   Gene Expression and Function
                       eukaryotes takes place at only a single site on the mRNA,
                       and each mRNA is monocistronic—it contains the informa-  learning objectives
                       tion for translating only a single kind of polypeptide.
                          Another difference between prokaryotic and eukaryotic   1.  Compare silent mutations, missense mutations,
                       translation is in the composition of the initiating tRNA. In   nonsense mutations, and frameshift mutations in terms
                       prokaryotes, as already mentioned, this tRNA carries a    of how they alter a gene product.
                       modified form of methionine known as N-formylmethionine,   2.  Discuss mutations outside the coding sequence that
                       while in eukaryotes, it carries an unmodified methionine   could affect gene expression.
                       (Table 8.1). Thus, immediately after translation, eukaryotic   3.  Explain why most loss-of-function alleles (hypomorphic
                       polypeptides all have Met (instead of fMet) at their N    or amorphic) are recessive to wild-type alleles, but
                         termini. Posttranslational cleavage in both prokaryotes and   some are incompletely dominant or dominant.
                       eukaryotes, however, often creates mature proteins that no   4.  Contrast the actions of hypermorphic, neomorphic, and
                       longer have N-terminal fMet or Met (see Fig. 8.26a).      antimorphic gain-of-function alleles.
                                                                             5.  Give examples of mutations that can have global effects
                       Eukaryotic mRNAs Require More                             on gene expression.
                       Processing than Prokaryotic mRNAs
                       Table 8.1 reviews other important differences in gene   We have seen that the information in DNA is the starting
                       structure and expression between prokaryotes and eukary-  point of gene expression. The cell transcribes that informa-
                       otes. In particular, introns interrupt eukaryotic, but not pro-  tion into mRNA and then translates the mRNA information
                       karyotic, genes such that the splicing of a primary transcript   into protein. Mutations that alter the nucleotide pairs of DNA
                       is necessary for eukaryotic gene expression. Other types of   can modify any of the steps or products of gene expression.
                       RNA processing that occur in eukaryotes but not prokary-
                       otes add a methylated cap and a poly-A tail, respectively, to
                       the 5′ and 3′ ends of the mRNAs.                    Mutations in a Gene’s Coding Sequence
                                                                           May Alter the Gene Product
                        essential concepts                                 Because of the nature of the genetic code, mutations in a
                                                                           gene’s amino acid–encoding exons generate a range of re-
                         •  In prokaryotes, transcription and translation occur   percussions (Fig. 8.27a).
                          simultaneously. In eukaryotes, the nuclear membrane
                          restricts transcription to the nucleus; mRNAs are
                          translated only after transport into the cytoplasm.  Silent mutations
                         •  In eukaryotes, transcription initiation involves enhancer   One consequence of the code’s degeneracy is that some mu-
                          sequences located far from the promoter. In addition, the   tations, known as silent mutations, can change a codon into
                          chromatin of eukaryotic chromosomes must be unwound   a mutant codon that specifies exactly the same amino acid.
                          to allow access by RNA polymerase.               The majority of silent mutations change the third nucleotide
                         •  Prokaryotic mRNAs are polycistronic such that ribosomes   of a codon, the position at which most codons for the same
                          can translate several different polypeptides from a single   amino acid differ. For example, a change from GCA to GCC
                          mRNA. Eukaryotes have monocistronic mRNAs that can   in a codon would still yield alanine in the protein product.
                          be used to translate only a single protein.      Because silent mutations do not alter the amino acid com-
                         •  In prokaryotes, ribosomes bind to a sequence called the   position of the encoded polypeptide, such mutations usually
                          Shine-Dalgarno box adjacent to the AUG initiation codon.   affect neither gene expression nor phenotype.
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